Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ddx58Q6Q899 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Gm15321-201ENSMUST00000121290 288 ntBASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Gm16215-201ENSMUST00000161990 637 ntBASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Gm24694-201ENSMUST00000180054 110 ntBASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Gm27663-201ENSMUST00000184839 110 ntBASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ddx58Q6Q899 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gm23547-201ENSMUST00000158210 271 ntBASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gm29667-201ENSMUST00000190817 490 ntBASIC17.94■□□□□ 0.46
Ddx58Q6Q899 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ddx58Q6Q899 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Efs-202ENSMUST00000227037 2540 ntBASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 AC124732.1-201ENSMUST00000221551 910 ntBASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ddx58Q6Q899 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx58Q6Q899 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms