Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcc2Q6PDG5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Gm13365-201ENSMUST00000121188 973 ntBASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Rprl2-201ENSMUST00000157150 290 ntBASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcc2Q6PDG5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcc2Q6PDG5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc2Q6PDG5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.96■□□□□ 0.3
Smarcc2Q6PDG5 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc2Q6PDG5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc2Q6PDG5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Smarcc2Q6PDG5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Smarcc2Q6PDG5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Smarcc2Q6PDG5 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smarcc2Q6PDG5 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms