Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AtmQ62388 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AtmQ62388 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AtmQ62388 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.52□□□□□ -0.25
AtmQ62388 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.51□□□□□ -0.25
AtmQ62388 Gm13464-201ENSMUST00000119418 935 ntBASIC13.51□□□□□ -0.25
AtmQ62388 Gm16177-201ENSMUST00000120728 718 ntBASIC13.51□□□□□ -0.25
AtmQ62388 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Gm24514-201ENSMUST00000174961 285 ntBASIC13.51□□□□□ -0.25
AtmQ62388 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.51□□□□□ -0.25
AtmQ62388 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
AtmQ62388 Gm8598-201ENSMUST00000221184 836 ntBASIC13.51□□□□□ -0.25
AtmQ62388 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
AtmQ62388 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.51□□□□□ -0.25
AtmQ62388 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Gm27486-201ENSMUST00000184923 80 ntBASIC13.51□□□□□ -0.25
AtmQ62388 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AtmQ62388 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AtmQ62388 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Gm14263-201ENSMUST00000117955 746 ntBASIC13.5□□□□□ -0.25
AtmQ62388 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.5□□□□□ -0.25
AtmQ62388 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.5□□□□□ -0.25
AtmQ62388 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.5□□□□□ -0.25
AtmQ62388 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.5□□□□□ -0.25
AtmQ62388 Gm38266-201ENSMUST00000194931 421 ntBASIC13.5□□□□□ -0.25
AtmQ62388 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Gm13342-201ENSMUST00000121055 207 ntBASIC13.5□□□□□ -0.25
AtmQ62388 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.5□□□□□ -0.25
AtmQ62388 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AtmQ62388 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AtmQ62388 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Olfr286-202ENSMUST00000205305 969 ntBASIC13.49□□□□□ -0.25
AtmQ62388 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.49□□□□□ -0.25
AtmQ62388 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.49□□□□□ -0.25
AtmQ62388 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.49□□□□□ -0.25
AtmQ62388 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.49□□□□□ -0.25
AtmQ62388 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
AtmQ62388 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AtmQ62388 Gm15460-201ENSMUST00000118147 391 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms