Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Gm8410-201ENSMUST00000117225 605 ntBASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Gm13223-201ENSMUST00000118609 747 ntBASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Gm44872-201ENSMUST00000207864 420 ntBASIC17.46■□□□□ 0.39
Vps54Q5SPW0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vps54Q5SPW0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Vps54Q5SPW0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Vps54Q5SPW0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vps54Q5SPW0 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vps54Q5SPW0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps54Q5SPW0 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Auts2-212ENSMUST00000178555 309 ntBASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps54Q5SPW0 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Gm9719-201ENSMUST00000162765 543 ntBASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Gm27622-201ENSMUST00000183779 60 ntBASIC17.43■□□□□ 0.38
Vps54Q5SPW0 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vps54Q5SPW0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vps54Q5SPW0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms