Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm12203-201ENSMUST00000118235 598 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm12209-201ENSMUST00000120089 596 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm27772-201ENSMUST00000184900 187 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Gm29608-201ENSMUST00000190444 463 ntBASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Shank3Q4ACU6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Shank3Q4ACU6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Shank3Q4ACU6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Gm43133-201ENSMUST00000197472 463 ntBASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Gm45930-201ENSMUST00000221330 292 ntBASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Shank3Q4ACU6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.71■□□□□ 0.43
Shank3Q4ACU6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Gm13350-201ENSMUST00000120519 479 ntBASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Gm4271-201ENSMUST00000174444 973 ntBASIC17.71■□□□□ 0.43
Shank3Q4ACU6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms