Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim80Q3V061 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim80Q3V061 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim80Q3V061 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Trim80Q3V061 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim80Q3V061 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trim80Q3V061 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trim80Q3V061 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.05■□□□□ -0
Trim80Q3V061 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.05■□□□□ -0
Trim80Q3V061 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.05■□□□□ -0
Trim80Q3V061 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trim80Q3V061 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trim80Q3V061 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trim80Q3V061 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.05■□□□□ -0
Trim80Q3V061 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trim80Q3V061 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim80Q3V061 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.04■□□□□ -0
Trim80Q3V061 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim80Q3V061 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trim80Q3V061 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim80Q3V061 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Gm15173-201ENSMUST00000122049 433 ntBASIC15.04■□□□□ -0
Trim80Q3V061 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trim80Q3V061 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.04■□□□□ -0
Trim80Q3V061 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.04■□□□□ -0
Trim80Q3V061 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.04■□□□□ -0
Trim80Q3V061 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim80Q3V061 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trim80Q3V061 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim80Q3V061 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim80Q3V061 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trim80Q3V061 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.03■□□□□ -0
Trim80Q3V061 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.03■□□□□ -0
Trim80Q3V061 Gm14140-201ENSMUST00000119999 995 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms