Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Gm27867-201ENSMUST00000184778 125 ntBASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim40Q3UWA4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim40Q3UWA4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim40Q3UWA4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Gm15372-201ENSMUST00000120729 834 ntBASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Gm7506-201ENSMUST00000207758 815 ntBASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.64□□□□□ -0.23
Trim40Q3UWA4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim40Q3UWA4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms