Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vars2Q3U2A8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vars2Q3U2A8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vars2Q3U2A8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vars2Q3U2A8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Vars2Q3U2A8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vars2Q3U2A8 Gm11793-201ENSMUST00000120433 981 ntBASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm27772-201ENSMUST00000184900 187 ntBASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gm45865-201ENSMUST00000211815 945 ntBASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vars2Q3U2A8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Gm10156-201ENSMUST00000122364 462 ntBASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.82■□□□□ 0.44
Vars2Q3U2A8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm8213-201ENSMUST00000118191 441 ntBASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm24420-201ENSMUST00000176676 59 ntBASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm19891-201ENSMUST00000189771 303 ntBASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm43133-201ENSMUST00000197472 463 ntBASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm37015-201ENSMUST00000192763 1521 ntBASIC17.81■□□□□ 0.44
Vars2Q3U2A8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vars2Q3U2A8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Gm22323-201ENSMUST00000103832 109 ntBASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Olfr284-202ENSMUST00000206647 966 ntBASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Gm18027-201ENSMUST00000218947 619 ntBASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.8■□□□□ 0.44
Vars2Q3U2A8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Snora73a-201ENSMUST00000082453 205 ntBASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vars2Q3U2A8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms