Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.64□□□□□ -0.39
Q3U1D9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Q3U1D9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.63□□□□□ -0.39
Q3U1D9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.63□□□□□ -0.39
Q3U1D9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.63□□□□□ -0.39
Q3U1D9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.63□□□□□ -0.39
Q3U1D9 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.63□□□□□ -0.39
Q3U1D9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.63□□□□□ -0.39
Q3U1D9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Q3U1D9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.62□□□□□ -0.39
Q3U1D9 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Q3U1D9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Q3U1D9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Q3U1D9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Q3U1D9 Gm15653-201ENSMUST00000119247 907 ntBASIC12.62□□□□□ -0.39
Q3U1D9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.62□□□□□ -0.39
Q3U1D9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Gm27437-201ENSMUST00000183429 107 ntBASIC12.62□□□□□ -0.39
Q3U1D9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.62□□□□□ -0.39
Q3U1D9 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.62□□□□□ -0.39
Q3U1D9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Q3U1D9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Q3U1D9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Q3U1D9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Q3U1D9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Q3U1D9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Q3U1D9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Q3U1D9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Gm37230-201ENSMUST00000194491 818 ntBASIC12.61□□□□□ -0.39
Q3U1D9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.61□□□□□ -0.39
Q3U1D9 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.61□□□□□ -0.39
Q3U1D9 Gm9063-201ENSMUST00000223299 582 ntBASIC12.61□□□□□ -0.39
Q3U1D9 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.61□□□□□ -0.39
Q3U1D9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Q3U1D9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms