Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cul4aQ3TCH7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Gm10154-201ENSMUST00000084445 354 ntBASIC15.27■□□□□ 0.04
Cul4aQ3TCH7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cul4aQ3TCH7 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.26■□□□□ 0.03
Cul4aQ3TCH7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Gm9182-201ENSMUST00000217829 639 ntBASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cul4aQ3TCH7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms