Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Chd8Q09XV5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.88□□□□□ -0.35
Chd8Q09XV5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.88□□□□□ -0.35
Chd8Q09XV5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.88□□□□□ -0.35
Chd8Q09XV5 Gm15131-201ENSMUST00000119124 595 ntBASIC12.88□□□□□ -0.35
Chd8Q09XV5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.88□□□□□ -0.35
Chd8Q09XV5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Chd8Q09XV5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm11803-201ENSMUST00000119966 444 ntBASIC12.87□□□□□ -0.35
Chd8Q09XV5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm8894-201ENSMUST00000074642 666 ntBASIC12.87□□□□□ -0.35
Chd8Q09XV5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm11222-201ENSMUST00000119005 738 ntBASIC12.87□□□□□ -0.35
Chd8Q09XV5 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Chd8Q09XV5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm15240-201ENSMUST00000118156 720 ntBASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Chd8Q09XV5 Gm4607-201ENSMUST00000206649 577 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms