Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox4Q06831 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox4Q06831 Gm18049-201ENSMUST00000208909 581 ntBASIC14.31□□□□□ -0.12
Sox4Q06831 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.31□□□□□ -0.12
Sox4Q06831 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
Sox4Q06831 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Sox4Q06831 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Sox4Q06831 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Sox4Q06831 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Sox4Q06831 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Sox4Q06831 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sox4Q06831 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.3□□□□□ -0.12
Sox4Q06831 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.3□□□□□ -0.12
Sox4Q06831 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox4Q06831 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox4Q06831 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox4Q06831 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox4Q06831 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.29□□□□□ -0.12
Sox4Q06831 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox4Q06831 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox4Q06831 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox4Q06831 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox4Q06831 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox4Q06831 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sox4Q06831 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox4Q06831 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.28□□□□□ -0.12
Sox4Q06831 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox4Q06831 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox4Q06831 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox4Q06831 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox4Q06831 Gm29541-201ENSMUST00000191351 678 ntBASIC14.28□□□□□ -0.12
Sox4Q06831 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox4Q06831 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms