Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Gm26917-202ENSMUST00000192833 3329 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm8927-201ENSMUST00000181978 981 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Gm43058-201ENSMUST00000197645 625 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
PrkdcP97313 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.7□□□□□ -0.86
PrkdcP97313 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
PrkdcP97313 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC9.7□□□□□ -0.86
PrkdcP97313 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
PrkdcP97313 Gm14208-201ENSMUST00000119645 678 ntBASIC9.69□□□□□ -0.86
PrkdcP97313 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.69□□□□□ -0.86
PrkdcP97313 Gm14017-201ENSMUST00000121934 386 ntBASIC9.69□□□□□ -0.86
PrkdcP97313 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.69□□□□□ -0.86
PrkdcP97313 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.69□□□□□ -0.86
PrkdcP97313 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.69□□□□□ -0.86
PrkdcP97313 Gm42997-202ENSMUST00000200321 985 ntBASIC9.69□□□□□ -0.86
PrkdcP97313 Gm44545-201ENSMUST00000208262 746 ntBASIC9.69□□□□□ -0.86
PrkdcP97313 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC9.69□□□□□ -0.86
PrkdcP97313 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
PrkdcP97313 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.69□□□□□ -0.86
PrkdcP97313 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.69□□□□□ -0.86
PrkdcP97313 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC9.69□□□□□ -0.86
PrkdcP97313 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
PrkdcP97313 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
PrkdcP97313 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
PrkdcP97313 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC9.69□□□□□ -0.86
PrkdcP97313 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
PrkdcP97313 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
PrkdcP97313 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
PrkdcP97313 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
PrkdcP97313 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm14028-201ENSMUST00000117434 479 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Gm7857-201ENSMUST00000117957 358 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
PrkdcP97313 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.68□□□□□ -0.86
PrkdcP97313 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm37835-201ENSMUST00000193305 361 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Gm12203-201ENSMUST00000118235 598 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Gm12209-201ENSMUST00000120089 596 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 AC153366.2-201ENSMUST00000219461 1984 ntBASIC9.68□□□□□ -0.86
PrkdcP97313 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
PrkdcP97313 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
PrkdcP97313 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms