Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.38□□□□□ -0.75
Rpl39P62892 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Rpl39P62892 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Rpl39P62892 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rpl39P62892 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.37□□□□□ -0.75
Rpl39P62892 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Gm8097-201ENSMUST00000117903 829 ntBASIC10.37□□□□□ -0.75
Rpl39P62892 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC10.37□□□□□ -0.75
Rpl39P62892 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Mir6982-201ENSMUST00000184354 68 ntBASIC10.37□□□□□ -0.75
Rpl39P62892 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rpl39P62892 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rpl39P62892 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rpl39P62892 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.36□□□□□ -0.75
Rpl39P62892 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms