Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.54□□□□□ -0.08
Fdft1P53798 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.54□□□□□ -0.08
Fdft1P53798 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.54□□□□□ -0.08
Fdft1P53798 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.54□□□□□ -0.08
Fdft1P53798 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.54□□□□□ -0.08
Fdft1P53798 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.54□□□□□ -0.08
Fdft1P53798 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.54□□□□□ -0.08
Fdft1P53798 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Fdft1P53798 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Fdft1P53798 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.53□□□□□ -0.08
Fdft1P53798 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
Fdft1P53798 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Fdft1P53798 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Fdft1P53798 Gm1401-201ENSMUST00000122048 772 ntBASIC14.53□□□□□ -0.08
Fdft1P53798 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
Fdft1P53798 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.53□□□□□ -0.08
Fdft1P53798 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Fdft1P53798 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.53□□□□□ -0.08
Fdft1P53798 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.53□□□□□ -0.08
Fdft1P53798 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fdft1P53798 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.52□□□□□ -0.08
Fdft1P53798 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fdft1P53798 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Fdft1P53798 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Fdft1P53798 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Fdft1P53798 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Fdft1P53798 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Fdft1P53798 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.52□□□□□ -0.09
Fdft1P53798 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fdft1P53798 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.51□□□□□ -0.09
Fdft1P53798 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.51□□□□□ -0.09
Fdft1P53798 Gm2272-201ENSMUST00000194903 582 ntBASIC14.51□□□□□ -0.09
Fdft1P53798 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.51□□□□□ -0.09
Fdft1P53798 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.51□□□□□ -0.09
Fdft1P53798 Gm5364-201ENSMUST00000216789 889 ntBASIC14.51□□□□□ -0.09
Fdft1P53798 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fdft1P53798 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms