Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Gm8749-201ENSMUST00000117737 331 ntBASIC12.59□□□□□ -0.39
TgfaP48030 Gm11425-201ENSMUST00000119608 498 ntBASIC12.59□□□□□ -0.39
TgfaP48030 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.59□□□□□ -0.39
TgfaP48030 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.59□□□□□ -0.39
TgfaP48030 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.59□□□□□ -0.39
TgfaP48030 Gm9396-201ENSMUST00000076703 567 ntBASIC12.59□□□□□ -0.39
TgfaP48030 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
TgfaP48030 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TgfaP48030 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TgfaP48030 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TgfaP48030 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TgfaP48030 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TgfaP48030 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TgfaP48030 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.58□□□□□ -0.39
TgfaP48030 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TgfaP48030 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TgfaP48030 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.58□□□□□ -0.4
TgfaP48030 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.58□□□□□ -0.4
TgfaP48030 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.58□□□□□ -0.4
TgfaP48030 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.58□□□□□ -0.4
TgfaP48030 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.58□□□□□ -0.4
TgfaP48030 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.58□□□□□ -0.4
TgfaP48030 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Gm9726-201ENSMUST00000180321 678 ntBASIC12.58□□□□□ -0.4
TgfaP48030 Gm5354-201ENSMUST00000182417 973 ntBASIC12.58□□□□□ -0.4
TgfaP48030 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Gm27701-201ENSMUST00000184498 110 ntBASIC12.58□□□□□ -0.4
TgfaP48030 Gm27892-201ENSMUST00000185017 106 ntBASIC12.58□□□□□ -0.4
TgfaP48030 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.58□□□□□ -0.4
TgfaP48030 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.58□□□□□ -0.4
TgfaP48030 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.58□□□□□ -0.4
TgfaP48030 Gm5035-201ENSMUST00000215581 927 ntBASIC12.58□□□□□ -0.4
TgfaP48030 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.58□□□□□ -0.4
TgfaP48030 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TgfaP48030 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TgfaP48030 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
TgfaP48030 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TgfaP48030 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.57□□□□□ -0.4
TgfaP48030 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.57□□□□□ -0.4
TgfaP48030 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Mir6420-201ENSMUST00000185032 102 ntBASIC12.57□□□□□ -0.4
TgfaP48030 Gm28911-201ENSMUST00000188837 117 ntBASIC12.57□□□□□ -0.4
TgfaP48030 Gm37230-201ENSMUST00000194491 818 ntBASIC12.57□□□□□ -0.4
TgfaP48030 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.57□□□□□ -0.4
TgfaP48030 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.57□□□□□ -0.4
TgfaP48030 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TgfaP48030 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TgfaP48030 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TgfaP48030 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms