Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm13036-201ENSMUST00000117799 748 ntBASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.05□□□□□ -0.16
Tnfsf4P43488 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.05□□□□□ -0.16
Tnfsf4P43488 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.05□□□□□ -0.16
Tnfsf4P43488 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.05□□□□□ -0.16
Tnfsf4P43488 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Tnfsf4P43488 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.04□□□□□ -0.16
Tnfsf4P43488 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf4P43488 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Gm27300-201ENSMUST00000184085 97 ntBASIC14.03□□□□□ -0.16
Tnfsf4P43488 Gm27335-201ENSMUST00000184758 97 ntBASIC14.03□□□□□ -0.16
Tnfsf4P43488 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf4P43488 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf4P43488 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms