Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.87□□□□□ -0.03
Cxcl12P40224 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.87□□□□□ -0.03
Cxcl12P40224 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Cxcl12P40224 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cxcl12P40224 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.86□□□□□ -0.03
Cxcl12P40224 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.86□□□□□ -0.03
Cxcl12P40224 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Cxcl12P40224 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.86□□□□□ -0.03
Cxcl12P40224 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.86□□□□□ -0.03
Cxcl12P40224 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Cxcl12P40224 Gm29127-201ENSMUST00000188304 517 ntBASIC14.86□□□□□ -0.03
Cxcl12P40224 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.86□□□□□ -0.03
Cxcl12P40224 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.86□□□□□ -0.03
Cxcl12P40224 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cxcl12P40224 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cxcl12P40224 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Gm5370-201ENSMUST00000187187 574 ntBASIC14.85□□□□□ -0.03
Cxcl12P40224 Gm18827-201ENSMUST00000188341 790 ntBASIC14.85□□□□□ -0.03
Cxcl12P40224 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.85□□□□□ -0.03
Cxcl12P40224 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cxcl12P40224 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cxcl12P40224 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms