Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PdgfbP31240 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PdgfbP31240 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.46□□□□□ -0.09
PdgfbP31240 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.46□□□□□ -0.09
PdgfbP31240 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PdgfbP31240 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.46□□□□□ -0.09
PdgfbP31240 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.46□□□□□ -0.09
PdgfbP31240 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.46□□□□□ -0.09
PdgfbP31240 Gm27847-201ENSMUST00000183711 107 ntBASIC14.46□□□□□ -0.09
PdgfbP31240 Gm27375-201ENSMUST00000183799 107 ntBASIC14.46□□□□□ -0.09
PdgfbP31240 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.46□□□□□ -0.09
PdgfbP31240 Gm7287-201ENSMUST00000205267 602 ntBASIC14.46□□□□□ -0.09
PdgfbP31240 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.46□□□□□ -0.09
PdgfbP31240 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PdgfbP31240 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdgfbP31240 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdgfbP31240 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdgfbP31240 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdgfbP31240 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PdgfbP31240 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.46□□□□□ -0.09
PdgfbP31240 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdgfbP31240 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdgfbP31240 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
PdgfbP31240 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdgfbP31240 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PdgfbP31240 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.46□□□□□ -0.1
PdgfbP31240 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PdgfbP31240 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Gm29127-201ENSMUST00000188304 517 ntBASIC14.45□□□□□ -0.1
PdgfbP31240 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
PdgfbP31240 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.45□□□□□ -0.1
PdgfbP31240 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PdgfbP31240 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Gm23931-201ENSMUST00000103842 109 ntBASIC14.44□□□□□ -0.1
PdgfbP31240 Gm15429-201ENSMUST00000151268 798 ntBASIC14.44□□□□□ -0.1
PdgfbP31240 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.44□□□□□ -0.1
PdgfbP31240 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.44□□□□□ -0.1
PdgfbP31240 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
PdgfbP31240 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.44□□□□□ -0.1
PdgfbP31240 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PdgfbP31240 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PdgfbP31240 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PdgfbP31240 Gm12928-201ENSMUST00000117115 573 ntBASIC14.43□□□□□ -0.1
PdgfbP31240 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.43□□□□□ -0.1
PdgfbP31240 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.43□□□□□ -0.1
PdgfbP31240 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.43□□□□□ -0.1
PdgfbP31240 Gm4804-201ENSMUST00000182234 999 ntBASIC14.43□□□□□ -0.1
PdgfbP31240 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.43□□□□□ -0.1
PdgfbP31240 Gm18827-201ENSMUST00000188341 790 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms