Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vcam1P29533 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.64■□□□□ 0.25
Vcam1P29533 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.64■□□□□ 0.25
Vcam1P29533 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.64■□□□□ 0.25
Vcam1P29533 Gm9908-201ENSMUST00000211534 448 ntBASIC16.64■□□□□ 0.25
Vcam1P29533 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.64■□□□□ 0.25
Vcam1P29533 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.64■□□□□ 0.25
Vcam1P29533 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vcam1P29533 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vcam1P29533 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vcam1P29533 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Vcam1P29533 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.63■□□□□ 0.25
Vcam1P29533 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Vcam1P29533 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.63■□□□□ 0.25
Vcam1P29533 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.63■□□□□ 0.25
Vcam1P29533 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.63■□□□□ 0.25
Vcam1P29533 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.63■□□□□ 0.25
Vcam1P29533 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.63■□□□□ 0.25
Vcam1P29533 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.63■□□□□ 0.25
Vcam1P29533 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.63■□□□□ 0.25
Vcam1P29533 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Vcam1P29533 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.63■□□□□ 0.25
Vcam1P29533 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Vcam1P29533 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Vcam1P29533 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Vcam1P29533 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vcam1P29533 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vcam1P29533 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.62■□□□□ 0.25
Vcam1P29533 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.62■□□□□ 0.25
Vcam1P29533 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Vcam1P29533 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vcam1P29533 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.62■□□□□ 0.25
Vcam1P29533 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.62■□□□□ 0.25
Vcam1P29533 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Vcam1P29533 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vcam1P29533 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.62■□□□□ 0.25
Vcam1P29533 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vcam1P29533 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Vcam1P29533 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vcam1P29533 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.61■□□□□ 0.25
Vcam1P29533 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Gm12091-201ENSMUST00000146791 830 ntBASIC16.61■□□□□ 0.25
Vcam1P29533 Gm21470-201ENSMUST00000187680 696 ntBASIC16.61■□□□□ 0.25
Vcam1P29533 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vcam1P29533 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vcam1P29533 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.61■□□□□ 0.25
Vcam1P29533 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms