Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.29□□□□□ -0.6
Ccl1P10146 Gm18622-201ENSMUST00000219361 595 ntBASIC11.29□□□□□ -0.6
Ccl1P10146 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.29□□□□□ -0.6
Ccl1P10146 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccl1P10146 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccl1P10146 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.29□□□□□ -0.6
Ccl1P10146 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl1P10146 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.28□□□□□ -0.6
Ccl1P10146 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl1P10146 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl1P10146 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Gm13312-201ENSMUST00000119631 718 ntBASIC11.28□□□□□ -0.6
Ccl1P10146 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ccl1P10146 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.28□□□□□ -0.6
Ccl1P10146 Gm43767-201ENSMUST00000198933 381 ntBASIC11.28□□□□□ -0.6
Ccl1P10146 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccl1P10146 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.28□□□□□ -0.6
Ccl1P10146 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl1P10146 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.28□□□□□ -0.6
Ccl1P10146 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl1P10146 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl1P10146 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl1P10146 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl1P10146 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Ccl1P10146 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.27□□□□□ -0.6
Ccl1P10146 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl1P10146 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl1P10146 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl1P10146 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl1P10146 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl1P10146 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl1P10146 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Ccl1P10146 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccl1P10146 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.27□□□□□ -0.61
Ccl1P10146 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl1P10146 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl1P10146 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl1P10146 AL672049.1-201ENSMUST00000197943 91 ntBASIC11.27□□□□□ -0.61
Ccl1P10146 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.27□□□□□ -0.61
Ccl1P10146 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Ccl1P10146 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccl1P10146 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms