Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxa6P09092 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxa6P09092 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxa6P09092 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Hoxa6P09092 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Hoxa6P09092 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Hoxa6P09092 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxa6P09092 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Hoxa6P09092 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.52□□□□□ -0.41
Hoxa6P09092 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxa6P09092 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa6P09092 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Hoxa6P09092 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxa6P09092 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxa6P09092 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxa6P09092 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Hoxa6P09092 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxa6P09092 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Gm8410-201ENSMUST00000117225 605 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hoxa6P09092 Gm13823-201ENSMUST00000119930 345 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Gm14767-201ENSMUST00000121559 586 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Mir7684-201ENSMUST00000183858 60 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Mir8102-201ENSMUST00000184148 139 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Gm27680-201ENSMUST00000184192 160 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxa6P09092 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Gm9182-201ENSMUST00000217829 639 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxa6P09092 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxa6P09092 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.51□□□□□ -0.41
Hoxa6P09092 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxa6P09092 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms