Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cops4O88544 Gm7977-201ENSMUST00000193787 748 ntBASIC13.45□□□□□ -0.26
Cops4O88544 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.45□□□□□ -0.26
Cops4O88544 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.45□□□□□ -0.26
Cops4O88544 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.45□□□□□ -0.26
Cops4O88544 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.44□□□□□ -0.26
Cops4O88544 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.44□□□□□ -0.26
Cops4O88544 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cops4O88544 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.44□□□□□ -0.26
Cops4O88544 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cops4O88544 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cops4O88544 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.43□□□□□ -0.26
Cops4O88544 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.43□□□□□ -0.26
Cops4O88544 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.43□□□□□ -0.26
Cops4O88544 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.43□□□□□ -0.26
Cops4O88544 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cops4O88544 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cops4O88544 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Cops4O88544 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.42□□□□□ -0.26
Cops4O88544 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.42□□□□□ -0.26
Cops4O88544 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cops4O88544 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cops4O88544 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms