Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
Vti1bO88384 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1bO88384 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.89□□□□□ -0.19
Vti1bO88384 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.89□□□□□ -0.19
Vti1bO88384 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1bO88384 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.89□□□□□ -0.19
Vti1bO88384 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1bO88384 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1bO88384 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Vti1bO88384 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.89□□□□□ -0.19
Vti1bO88384 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1bO88384 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vti1bO88384 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.88□□□□□ -0.19
Vti1bO88384 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.88□□□□□ -0.19
Vti1bO88384 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.88□□□□□ -0.19
Vti1bO88384 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.88□□□□□ -0.19
Vti1bO88384 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.88□□□□□ -0.19
Vti1bO88384 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1bO88384 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vti1bO88384 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Carlr-201ENSMUST00000181515 2574 ntBASIC13.87□□□□□ -0.19
Vti1bO88384 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Vti1bO88384 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.87□□□□□ -0.19
Vti1bO88384 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Gm1401-201ENSMUST00000122048 772 ntBASIC13.87□□□□□ -0.19
Vti1bO88384 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.87□□□□□ -0.19
Vti1bO88384 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.87□□□□□ -0.19
Vti1bO88384 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.87□□□□□ -0.19
Vti1bO88384 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.87□□□□□ -0.19
Vti1bO88384 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.87□□□□□ -0.19
Vti1bO88384 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.87□□□□□ -0.19
Vti1bO88384 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.87□□□□□ -0.19
Vti1bO88384 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Vti1bO88384 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vti1bO88384 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vti1bO88384 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Vti1bO88384 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vti1bO88384 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vti1bO88384 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms