Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44357-201ENSMUST00000195897 142 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm19658-201ENSMUST00000196231 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44367-201ENSMUST00000196836 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44350-201ENSMUST00000197197 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44390-201ENSMUST00000197533 144 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm6089-201ENSMUST00000197666 938 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44313-201ENSMUST00000198018 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44486-201ENSMUST00000198508 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44314-201ENSMUST00000199263 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44394-201ENSMUST00000199558 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44484-201ENSMUST00000199873 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44466-201ENSMUST00000200264 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Gm44359-201ENSMUST00000200671 138 ntBASIC13.2□□□□□ -0.3
Rnf13O54965 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf13O54965 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf13O54965 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.2□□□□□ -0.3
Rnf13O54965 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rnf13O54965 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rnf13O54965 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.19□□□□□ -0.3
Rnf13O54965 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.19□□□□□ -0.3
Rnf13O54965 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.19□□□□□ -0.3
Rnf13O54965 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.19□□□□□ -0.3
Rnf13O54965 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Ank2-226ENSMUST00000189368 339 ntBASIC13.19□□□□□ -0.3
Rnf13O54965 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf13O54965 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf13O54965 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rnf13O54965 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf13O54965 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Rnf13O54965 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rnf13O54965 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf13O54965 Gm43347-201ENSMUST00000200226 580 ntBASIC13.18□□□□□ -0.3
Rnf13O54965 Gm7787-201ENSMUST00000216858 688 ntBASIC13.18□□□□□ -0.3
Rnf13O54965 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf13O54965 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf13O54965 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf13O54965 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf13O54965 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf13O54965 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf13O54965 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf13O54965 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms