Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.62■□□□□ 0.09
Nr1i3O35627 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.62■□□□□ 0.09
Nr1i3O35627 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.62■□□□□ 0.09
Nr1i3O35627 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nr1i3O35627 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nr1i3O35627 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Gm9385-201ENSMUST00000117563 472 ntBASIC15.61■□□□□ 0.09
Nr1i3O35627 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Gm10275-202ENSMUST00000168697 495 ntBASIC15.61■□□□□ 0.09
Nr1i3O35627 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Gm10275-201ENSMUST00000092620 635 ntBASIC15.61■□□□□ 0.09
Nr1i3O35627 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Nr1i3O35627 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Nr1i3O35627 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nr1i3O35627 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.6■□□□□ 0.09
Nr1i3O35627 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.6■□□□□ 0.09
Nr1i3O35627 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.6■□□□□ 0.09
Nr1i3O35627 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nr1i3O35627 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nr1i3O35627 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms