Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.4■□□□□ 0.38
Ube4aE9Q735 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ube4aE9Q735 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ube4aE9Q735 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ube4aE9Q735 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ube4aE9Q735 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Ube4aE9Q735 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ube4aE9Q735 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ube4aE9Q735 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm6912-201ENSMUST00000117218 544 ntBASIC17.38■□□□□ 0.37
Ube4aE9Q735 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm21470-201ENSMUST00000187680 696 ntBASIC17.38■□□□□ 0.37
Ube4aE9Q735 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm9908-201ENSMUST00000211534 448 ntBASIC17.38■□□□□ 0.37
Ube4aE9Q735 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm18624-201ENSMUST00000220966 658 ntBASIC17.38■□□□□ 0.37
Ube4aE9Q735 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.38■□□□□ 0.37
Ube4aE9Q735 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ube4aE9Q735 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Gm12091-201ENSMUST00000146791 830 ntBASIC17.37■□□□□ 0.37
Ube4aE9Q735 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ube4aE9Q735 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.37■□□□□ 0.37
Ube4aE9Q735 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.37■□□□□ 0.37
Ube4aE9Q735 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms