Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm43916-201ENSMUST00000205062 967 ntBASIC7.94□□□□□ -1.14
Herc1E9PZP8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC7.94□□□□□ -1.14
Herc1E9PZP8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Mir6941-201ENSMUST00000184711 59 ntBASIC7.94□□□□□ -1.14
Herc1E9PZP8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Herc1E9PZP8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm17040-202ENSMUST00000170597 889 ntBASIC7.93□□□□□ -1.14
Herc1E9PZP8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm14005-208ENSMUST00000223654 681 ntBASIC7.93□□□□□ -1.14
Herc1E9PZP8 AC154184.3-201ENSMUST00000225620 1090 ntBASIC7.93□□□□□ -1.14
Herc1E9PZP8 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm38317-201ENSMUST00000195564 343 ntBASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm42511-201ENSMUST00000196160 234 ntBASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm19353-201ENSMUST00000184561 445 ntBASIC7.93□□□□□ -1.14
Herc1E9PZP8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Herc1E9PZP8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms