Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.65■□□□□ 0.26
Syce3B5KM66 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.65■□□□□ 0.26
Syce3B5KM66 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Syce3B5KM66 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Syce3B5KM66 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Syce3B5KM66 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Syce3B5KM66 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Gm23634-201ENSMUST00000175071 91 ntBASIC16.64■□□□□ 0.25
Syce3B5KM66 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.64■□□□□ 0.25
Syce3B5KM66 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.64■□□□□ 0.25
Syce3B5KM66 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Syce3B5KM66 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Syce3B5KM66 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Syce3B5KM66 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.63■□□□□ 0.25
Syce3B5KM66 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.63■□□□□ 0.25
Syce3B5KM66 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Syce3B5KM66 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Syce3B5KM66 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.63■□□□□ 0.25
Syce3B5KM66 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.62■□□□□ 0.25
Syce3B5KM66 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.62■□□□□ 0.25
Syce3B5KM66 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Syce3B5KM66 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.62■□□□□ 0.25
Syce3B5KM66 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.62■□□□□ 0.25
Syce3B5KM66 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Syce3B5KM66 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.62■□□□□ 0.25
Syce3B5KM66 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.62■□□□□ 0.25
Syce3B5KM66 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms