Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Proscos-202ENSMUST00000178990 666 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm8927-201ENSMUST00000181978 981 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm3222-201ENSMUST00000071282 990 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col4a6B1AVK5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.69□□□□□ -0.06
Col4a6B1AVK5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col4a6B1AVK5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Gm22018-201ENSMUST00000104357 131 ntBASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Gm18473-201ENSMUST00000220543 868 ntBASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col4a6B1AVK5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Gm6152-201ENSMUST00000151704 340 ntBASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Mir3102-201ENSMUST00000175555 104 ntBASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Gm24420-201ENSMUST00000176676 59 ntBASIC14.66□□□□□ -0.06
Col4a6B1AVK5 Mir8109-201ENSMUST00000184375 117 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms