Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44357-201ENSMUST00000195897 142 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm19658-201ENSMUST00000196231 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44367-201ENSMUST00000196836 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44350-201ENSMUST00000197197 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44390-201ENSMUST00000197533 144 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44313-201ENSMUST00000198018 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44486-201ENSMUST00000198508 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44314-201ENSMUST00000199263 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44394-201ENSMUST00000199558 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44484-201ENSMUST00000199873 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44466-201ENSMUST00000200264 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm44359-201ENSMUST00000200671 138 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm18669-201ENSMUST00000216049 778 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav12d-1A0N8R0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12d-1A0N8R0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12d-1A0N8R0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms