Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm25287-201ENSMUST00000103846 110 ntBASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm22918-201ENSMUST00000103855 110 ntBASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm29541-201ENSMUST00000191351 678 ntBASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.64■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm29310-201ENSMUST00000185468 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21825-201ENSMUST00000185728 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm29109-201ENSMUST00000185895 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21896-201ENSMUST00000186520 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21873-201ENSMUST00000186728 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21794-201ENSMUST00000187056 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21880-201ENSMUST00000187275 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21826-201ENSMUST00000187451 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21198-201ENSMUST00000188393 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21749-201ENSMUST00000189343 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21901-201ENSMUST00000189568 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm29424-201ENSMUST00000189716 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm28599-201ENSMUST00000189838 694 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21867-201ENSMUST00000189917 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm29269-201ENSMUST00000190087 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21722-201ENSMUST00000190153 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm28423-201ENSMUST00000190701 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21899-201ENSMUST00000190745 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21910-201ENSMUST00000191163 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21849-201ENSMUST00000191571 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm28678-201ENSMUST00000191593 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm20910-201ENSMUST00000193268 696 ntBASIC17.64■□□□□ 0.41
Atg4a-psA0A0G2JFS9 Gm21871-201ENSMUST00000194621 696 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms