Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm42928-201ENSMUST00000197338 3339 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm18856-201ENSMUST00000178096 1374 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm8097-201ENSMUST00000117903 829 ntBASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm27741-201ENSMUST00000185060 237 ntBASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm18622-201ENSMUST00000219361 595 ntBASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.88□□□□□ -0.67
Trav6n-6A0A075B6B2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms