Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16nA0A075B634 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16nA0A075B634 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Gm42471-201ENSMUST00000201457 1865 ntBASIC11□□□□□ -0.65
Trav16nA0A075B634 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Gm10231-201ENSMUST00000181584 441 ntBASIC11□□□□□ -0.65
Trav16nA0A075B634 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Gm10175-202ENSMUST00000208752 441 ntBASIC11□□□□□ -0.65
Trav16nA0A075B634 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11□□□□□ -0.65
Trav16nA0A075B634 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav16nA0A075B634 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms