Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Naf1Q3UMQ8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Naf1Q3UMQ8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Naf1Q3UMQ8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Naf1Q3UMQ8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Naf1Q3UMQ8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Naf1Q3UMQ8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.53■■□□□ 1.2
Naf1Q3UMQ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Naf1Q3UMQ8 Gm13238-201ENSMUST00000117655 780 ntBASIC22.52■■□□□ 1.2
Naf1Q3UMQ8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.52■■□□□ 1.2
Naf1Q3UMQ8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Naf1Q3UMQ8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Naf1Q3UMQ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Naf1Q3UMQ8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Naf1Q3UMQ8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Naf1Q3UMQ8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
Naf1Q3UMQ8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Naf1Q3UMQ8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 Gm5812-201ENSMUST00000061073 957 ntBASIC22.5■■□□□ 1.19
Naf1Q3UMQ8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Naf1Q3UMQ8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Naf1Q3UMQ8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Naf1Q3UMQ8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Naf1Q3UMQ8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Naf1Q3UMQ8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Naf1Q3UMQ8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Naf1Q3UMQ8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Naf1Q3UMQ8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Naf1Q3UMQ8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Naf1Q3UMQ8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Naf1Q3UMQ8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Naf1Q3UMQ8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Naf1Q3UMQ8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
Naf1Q3UMQ8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Naf1Q3UMQ8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Naf1Q3UMQ8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Naf1Q3UMQ8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.44■■□□□ 1.18
Naf1Q3UMQ8 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.44■■□□□ 1.18
Naf1Q3UMQ8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Naf1Q3UMQ8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Naf1Q3UMQ8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.42■■□□□ 1.18
Naf1Q3UMQ8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Naf1Q3UMQ8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Naf1Q3UMQ8 Gm43566-201ENSMUST00000196851 808 ntBASIC22.41■■□□□ 1.18
Naf1Q3UMQ8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Naf1Q3UMQ8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Naf1Q3UMQ8 Gm45444-201ENSMUST00000211394 898 ntBASIC22.4■■□□□ 1.18
Naf1Q3UMQ8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Naf1Q3UMQ8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Naf1Q3UMQ8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Naf1Q3UMQ8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.39■■□□□ 1.18
Naf1Q3UMQ8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
Naf1Q3UMQ8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Naf1Q3UMQ8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Naf1Q3UMQ8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Naf1Q3UMQ8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Naf1Q3UMQ8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Naf1Q3UMQ8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Naf1Q3UMQ8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Naf1Q3UMQ8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.36■■□□□ 1.17
Naf1Q3UMQ8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Naf1Q3UMQ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Naf1Q3UMQ8 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms