Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cln6Q3U466 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cln6Q3U466 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cln6Q3U466 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cln6Q3U466 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Cln6Q3U466 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cln6Q3U466 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cln6Q3U466 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cln6Q3U466 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cln6Q3U466 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cln6Q3U466 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.68■□□□□ 0.58
Cln6Q3U466 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cln6Q3U466 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cln6Q3U466 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Cln6Q3U466 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cln6Q3U466 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.66■□□□□ 0.58
Cln6Q3U466 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cln6Q3U466 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cln6Q3U466 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cln6Q3U466 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cln6Q3U466 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cln6Q3U466 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cln6Q3U466 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cln6Q3U466 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cln6Q3U466 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln6Q3U466 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln6Q3U466 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cln6Q3U466 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cln6Q3U466 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Cln6Q3U466 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cln6Q3U466 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cln6Q3U466 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cln6Q3U466 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.62■□□□□ 0.57
Cln6Q3U466 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cln6Q3U466 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cln6Q3U466 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.61■□□□□ 0.57
Cln6Q3U466 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cln6Q3U466 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.61■□□□□ 0.57
Cln6Q3U466 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cln6Q3U466 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.6■□□□□ 0.57
Cln6Q3U466 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cln6Q3U466 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cln6Q3U466 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Cln6Q3U466 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln6Q3U466 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln6Q3U466 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cln6Q3U466 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Cln6Q3U466 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cln6Q3U466 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms