Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Chd8Q09XV5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.78■□□□□ 0.92
Chd8Q09XV5 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.78■□□□□ 0.92
Chd8Q09XV5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd8Q09XV5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chd8Q09XV5 Gm22325-201ENSMUST00000158904 308 ntBASIC20.78■□□□□ 0.92
Chd8Q09XV5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.78■□□□□ 0.92
Chd8Q09XV5 Spcs1-204ENSMUST00000226782 949 ntBASIC20.78■□□□□ 0.92
Chd8Q09XV5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chd8Q09XV5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chd8Q09XV5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd8Q09XV5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chd8Q09XV5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chd8Q09XV5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.76■□□□□ 0.91
Chd8Q09XV5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.76■□□□□ 0.91
Chd8Q09XV5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.75■□□□□ 0.91
Chd8Q09XV5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd8Q09XV5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd8Q09XV5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd8Q09XV5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chd8Q09XV5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.75■□□□□ 0.91
Chd8Q09XV5 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.74■□□□□ 0.91
Chd8Q09XV5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd8Q09XV5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.74■□□□□ 0.91
Chd8Q09XV5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd8Q09XV5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd8Q09XV5 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd8Q09XV5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chd8Q09XV5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd8Q09XV5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.73■□□□□ 0.91
Chd8Q09XV5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd8Q09XV5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd8Q09XV5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd8Q09XV5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.72■□□□□ 0.91
Chd8Q09XV5 Gm6139-201ENSMUST00000079261 882 ntBASIC20.72■□□□□ 0.91
Chd8Q09XV5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd8Q09XV5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd8Q09XV5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd8Q09XV5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.7■□□□□ 0.9
Chd8Q09XV5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Chd8Q09XV5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd8Q09XV5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd8Q09XV5 Gm27405-201ENSMUST00000184201 112 ntBASIC20.69■□□□□ 0.9
Chd8Q09XV5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.69■□□□□ 0.9
Chd8Q09XV5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chd8Q09XV5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd8Q09XV5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd8Q09XV5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd8Q09XV5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd8Q09XV5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.68■□□□□ 0.9
Chd8Q09XV5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd8Q09XV5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd8Q09XV5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.67■□□□□ 0.9
Chd8Q09XV5 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.67■□□□□ 0.9
Chd8Q09XV5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd8Q09XV5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.67■□□□□ 0.9
Chd8Q09XV5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chd8Q09XV5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chd8Q09XV5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd8Q09XV5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd8Q09XV5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.66■□□□□ 0.9
Chd8Q09XV5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.66■□□□□ 0.9
Chd8Q09XV5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd8Q09XV5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.65■□□□□ 0.9
Chd8Q09XV5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd8Q09XV5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Chd8Q09XV5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chd8Q09XV5 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.64■□□□□ 0.9
Chd8Q09XV5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.64■□□□□ 0.9
Chd8Q09XV5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd8Q09XV5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Chd8Q09XV5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Chd8Q09XV5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.64■□□□□ 0.89
Chd8Q09XV5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd8Q09XV5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd8Q09XV5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd8Q09XV5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd8Q09XV5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd8Q09XV5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd8Q09XV5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd8Q09XV5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd8Q09XV5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd8Q09XV5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chd8Q09XV5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chd8Q09XV5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd8Q09XV5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd8Q09XV5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.6■□□□□ 0.89
Chd8Q09XV5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd8Q09XV5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd8Q09XV5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd8Q09XV5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.6■□□□□ 0.89
Chd8Q09XV5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd8Q09XV5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.59■□□□□ 0.89
Chd8Q09XV5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd8Q09XV5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd8Q09XV5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Chd8Q09XV5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd8Q09XV5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Chd8Q09XV5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd8Q09XV5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms