Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nek1P51954 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Nek1P51954 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
Nek1P51954 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Nek1P51954 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nek1P51954 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nek1P51954 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Nek1P51954 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Nek1P51954 Gm4799-201ENSMUST00000095396 657 ntBASIC24.62■■□□□ 1.53
Nek1P51954 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nek1P51954 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nek1P51954 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Scarna2-201ENSMUST00000157560 414 ntBASIC24.61■■□□□ 1.53
Nek1P51954 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Nek1P51954 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nek1P51954 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Nek1P51954 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Nek1P51954 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Nek1P51954 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Nek1P51954 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Nek1P51954 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Nek1P51954 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Nek1P51954 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.59■■□□□ 1.53
Nek1P51954 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Nek1P51954 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nek1P51954 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nek1P51954 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.58■■□□□ 1.53
Nek1P51954 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nek1P51954 Gm11687-201ENSMUST00000118911 886 ntBASIC24.57■■□□□ 1.52
Nek1P51954 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Nek1P51954 Gm9812-201ENSMUST00000061934 968 ntBASIC24.57■■□□□ 1.52
Nek1P51954 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Nek1P51954 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.56■■□□□ 1.52
Nek1P51954 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Nek1P51954 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nek1P51954 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Nek1P51954 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nek1P51954 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.54■■□□□ 1.52
Nek1P51954 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Nek1P51954 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.54■■□□□ 1.52
Nek1P51954 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
Nek1P51954 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nek1P51954 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nek1P51954 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nek1P51954 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Nek1P51954 Gm9806-201ENSMUST00000051080 552 ntBASIC24.53■■□□□ 1.52
Nek1P51954 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Nek1P51954 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.53■■□□□ 1.52
Nek1P51954 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nek1P51954 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Nek1P51954 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nek1P51954 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nek1P51954 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.53■■□□□ 1.52
Nek1P51954 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Nek1P51954 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.52■■□□□ 1.52
Nek1P51954 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nek1P51954 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Nek1P51954 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nek1P51954 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC24.52■■□□□ 1.52
Nek1P51954 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nek1P51954 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nek1P51954 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.51■■□□□ 1.51
Nek1P51954 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nek1P51954 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Nek1P51954 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.51■■□□□ 1.51
Nek1P51954 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Nek1P51954 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Nek1P51954 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Nek1P51954 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Nek1P51954 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.5■■□□□ 1.51
Nek1P51954 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Nek1P51954 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Nek1P51954 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nek1P51954 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.49■■□□□ 1.51
Nek1P51954 Mir3960-201ENSMUST00000198213 73 ntBASIC24.49■■□□□ 1.51
Nek1P51954 Gm16437-201ENSMUST00000025669 507 ntBASIC24.49■■□□□ 1.51
Nek1P51954 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nek1P51954 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Nek1P51954 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nek1P51954 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Nek1P51954 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.48■■□□□ 1.51
Nek1P51954 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Nek1P51954 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Nek1P51954 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.48■■□□□ 1.51
Nek1P51954 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Nek1P51954 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Nek1P51954 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nek1P51954 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.47■■□□□ 1.51
Nek1P51954 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Nek1P51954 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.47■■□□□ 1.51
Nek1P51954 Gm45364-201ENSMUST00000210883 159 ntBASIC24.47■■□□□ 1.51
Nek1P51954 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.47■■□□□ 1.51
Nek1P51954 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Nek1P51954 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms