Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.88■□□□□ 0.93
RoraP51448 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RoraP51448 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.87■□□□□ 0.93
RoraP51448 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.87■□□□□ 0.93
RoraP51448 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.87■□□□□ 0.93
RoraP51448 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RoraP51448 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.86■□□□□ 0.93
RoraP51448 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RoraP51448 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RoraP51448 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.86■□□□□ 0.93
RoraP51448 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RoraP51448 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RoraP51448 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RoraP51448 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RoraP51448 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RoraP51448 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.84■□□□□ 0.93
RoraP51448 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RoraP51448 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RoraP51448 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
RoraP51448 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RoraP51448 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RoraP51448 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
RoraP51448 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RoraP51448 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RoraP51448 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.82■□□□□ 0.92
RoraP51448 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RoraP51448 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RoraP51448 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RoraP51448 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RoraP51448 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RoraP51448 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RoraP51448 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.8■□□□□ 0.92
RoraP51448 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.8■□□□□ 0.92
RoraP51448 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RoraP51448 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RoraP51448 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RoraP51448 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RoraP51448 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RoraP51448 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RoraP51448 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RoraP51448 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RoraP51448 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RoraP51448 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RoraP51448 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RoraP51448 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RoraP51448 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RoraP51448 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RoraP51448 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RoraP51448 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.78■□□□□ 0.92
RoraP51448 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RoraP51448 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RoraP51448 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.78■□□□□ 0.92
RoraP51448 Gm13238-201ENSMUST00000117655 780 ntBASIC20.78■□□□□ 0.92
RoraP51448 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RoraP51448 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RoraP51448 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RoraP51448 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RoraP51448 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RoraP51448 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.77■□□□□ 0.92
RoraP51448 Gm43566-201ENSMUST00000196851 808 ntBASIC20.77■□□□□ 0.92
RoraP51448 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RoraP51448 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Gm45444-201ENSMUST00000211394 898 ntBASIC20.76■□□□□ 0.91
RoraP51448 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.76■□□□□ 0.91
RoraP51448 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RoraP51448 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RoraP51448 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RoraP51448 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RoraP51448 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RoraP51448 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.75■□□□□ 0.91
RoraP51448 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RoraP51448 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RoraP51448 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RoraP51448 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RoraP51448 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RoraP51448 Gm15546-201ENSMUST00000122095 826 ntBASIC20.74■□□□□ 0.91
RoraP51448 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.74■□□□□ 0.91
RoraP51448 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RoraP51448 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RoraP51448 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RoraP51448 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RoraP51448 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RoraP51448 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RoraP51448 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RoraP51448 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RoraP51448 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RoraP51448 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms