Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.77■■□□□ 1.08
Slc1a6O35544 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.77■■□□□ 1.07
Slc1a6O35544 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slc1a6O35544 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc1a6O35544 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc1a6O35544 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc1a6O35544 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc1a6O35544 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc1a6O35544 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc1a6O35544 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.75■■□□□ 1.07
Slc1a6O35544 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Slc1a6O35544 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Slc1a6O35544 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc1a6O35544 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc1a6O35544 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc1a6O35544 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc1a6O35544 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc1a6O35544 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc1a6O35544 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc1a6O35544 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc1a6O35544 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc1a6O35544 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc1a6O35544 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slc1a6O35544 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Slc1a6O35544 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc1a6O35544 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Slc1a6O35544 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc1a6O35544 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.72■■□□□ 1.07
Slc1a6O35544 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Slc1a6O35544 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.72■■□□□ 1.07
Slc1a6O35544 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.72■■□□□ 1.07
Slc1a6O35544 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slc1a6O35544 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Slc1a6O35544 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc1a6O35544 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc1a6O35544 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.71■■□□□ 1.07
Slc1a6O35544 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Slc1a6O35544 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slc1a6O35544 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.71■■□□□ 1.07
Slc1a6O35544 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Slc1a6O35544 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc1a6O35544 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc1a6O35544 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc1a6O35544 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Slc1a6O35544 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Slc1a6O35544 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc1a6O35544 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.69■■□□□ 1.06
Slc1a6O35544 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc1a6O35544 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Slc1a6O35544 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc1a6O35544 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc1a6O35544 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Slc1a6O35544 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a6O35544 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a6O35544 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a6O35544 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Slc1a6O35544 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.67■■□□□ 1.06
Slc1a6O35544 Gm22567-201ENSMUST00000175542 342 ntBASIC21.67■■□□□ 1.06
Slc1a6O35544 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.67■■□□□ 1.06
Slc1a6O35544 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a6O35544 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a6O35544 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a6O35544 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Slc1a6O35544 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc1a6O35544 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Slc1a6O35544 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a6O35544 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a6O35544 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.66■■□□□ 1.06
Slc1a6O35544 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Slc1a6O35544 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a6O35544 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a6O35544 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Slc1a6O35544 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.65■■□□□ 1.06
Slc1a6O35544 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.65■■□□□ 1.06
Slc1a6O35544 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc1a6O35544 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Slc1a6O35544 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a6O35544 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a6O35544 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Slc1a6O35544 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc1a6O35544 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a6O35544 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a6O35544 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Slc1a6O35544 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Slc1a6O35544 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a6O35544 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a6O35544 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a6O35544 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a6O35544 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slc1a6O35544 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Slc1a6O35544 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Slc1a6O35544 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.62■■□□□ 1.05
Slc1a6O35544 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.61■■□□□ 1.05
Slc1a6O35544 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms