Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-1A0N8R0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-1A0N8R0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-1A0N8R0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-1A0N8R0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav12d-1A0N8R0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-1A0N8R0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.79■□□□□ 0.44
Trav12d-1A0N8R0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav12d-1A0N8R0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-1A0N8R0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12d-1A0N8R0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-1A0N8R0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-1A0N8R0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-1A0N8R0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12d-1A0N8R0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12d-1A0N8R0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12d-1A0N8R0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav12d-1A0N8R0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12d-1A0N8R0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12d-1A0N8R0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav12d-1A0N8R0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12d-1A0N8R0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12d-1A0N8R0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12d-1A0N8R0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12d-1A0N8R0 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.72■□□□□ 0.43
Trav12d-1A0N8R0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12d-1A0N8R0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12d-1A0N8R0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav12d-1A0N8R0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav12d-1A0N8R0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav12d-1A0N8R0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trav12d-1A0N8R0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.71■□□□□ 0.43
Trav12d-1A0N8R0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav12d-1A0N8R0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.71■□□□□ 0.42
Trav12d-1A0N8R0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12d-1A0N8R0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12d-1A0N8R0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12d-1A0N8R0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12d-1A0N8R0 Gm22567-201ENSMUST00000175542 342 ntBASIC17.69■□□□□ 0.42
Trav12d-1A0N8R0 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.69■□□□□ 0.42
Trav12d-1A0N8R0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav12d-1A0N8R0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12d-1A0N8R0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.67■□□□□ 0.42
Trav12d-1A0N8R0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav12d-1A0N8R0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12d-1A0N8R0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12d-1A0N8R0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12d-1A0N8R0 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.65■□□□□ 0.42
Trav12d-1A0N8R0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12d-1A0N8R0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12d-1A0N8R0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms