Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cx3cr1Q9Z0D9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Cx3cr1Q9Z0D9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cx3cr1Q9Z0D9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Cx3cr1Q9Z0D9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cx3cr1Q9Z0D9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 126 ms