Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Scn8aQ9WTU3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Scn8aQ9WTU3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Gm42612-201ENSMUST00000197986 623 ntBASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Gm43170-201ENSMUST00000199827 612 ntBASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Gm18027-201ENSMUST00000218947 619 ntBASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scn8aQ9WTU3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Gm15957-201ENSMUST00000118893 974 ntBASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Mir6977-201ENSMUST00000184960 64 ntBASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn8aQ9WTU3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms