Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Thap2-203ENSMUST00000218989 527 ntBASIC14.21□□□□□ -0.13
Cdh17Q9R100 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdh17Q9R100 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.21□□□□□ -0.14
Cdh17Q9R100 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cdh17Q9R100 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh17Q9R100 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh17Q9R100 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cdh17Q9R100 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.2□□□□□ -0.14
Cdh17Q9R100 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.2□□□□□ -0.14
Cdh17Q9R100 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Gm5177-201ENSMUST00000183092 997 ntBASIC14.2□□□□□ -0.14
Cdh17Q9R100 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.2□□□□□ -0.14
Cdh17Q9R100 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cdh17Q9R100 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.19□□□□□ -0.14
Cdh17Q9R100 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.19□□□□□ -0.14
Cdh17Q9R100 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdh17Q9R100 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.18□□□□□ -0.14
Cdh17Q9R100 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.18□□□□□ -0.14
Cdh17Q9R100 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.18□□□□□ -0.14
Cdh17Q9R100 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.18□□□□□ -0.14
Cdh17Q9R100 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.18□□□□□ -0.14
Cdh17Q9R100 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Cdh17Q9R100 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms