Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Celf4-206ENSMUST00000224553 1729 ntBASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Gm43474-201ENSMUST00000196415 774 ntBASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Gm43767-201ENSMUST00000198933 381 ntBASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Gm43125-201ENSMUST00000201724 730 ntBASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clcf1Q9QZM3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Gm6973-201ENSMUST00000117080 721 ntBASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Clcf1Q9QZM3 Efs-202ENSMUST00000227037 2540 ntBASIC13.21□□□□□ -0.29
Clcf1Q9QZM3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clcf1Q9QZM3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clcf1Q9QZM3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
Clcf1Q9QZM3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clcf1Q9QZM3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms