Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Gm15957-201ENSMUST00000118893 974 ntBASIC13.68□□□□□ -0.22
SrfQ9JM73 AY702102-202ENSMUST00000194651 1173 ntBASIC13.68□□□□□ -0.22
SrfQ9JM73 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.68□□□□□ -0.22
SrfQ9JM73 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.68□□□□□ -0.22
SrfQ9JM73 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SrfQ9JM73 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SrfQ9JM73 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SrfQ9JM73 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Gm13263-201ENSMUST00000121271 838 ntBASIC13.67□□□□□ -0.22
SrfQ9JM73 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.67□□□□□ -0.22
SrfQ9JM73 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Gm17794-201ENSMUST00000220252 955 ntBASIC13.67□□□□□ -0.22
SrfQ9JM73 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.67□□□□□ -0.22
SrfQ9JM73 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SrfQ9JM73 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.67□□□□□ -0.22
SrfQ9JM73 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SrfQ9JM73 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Gm27892-201ENSMUST00000185017 106 ntBASIC13.66□□□□□ -0.22
SrfQ9JM73 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC13.66□□□□□ -0.22
SrfQ9JM73 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Gm18307-201ENSMUST00000206864 949 ntBASIC13.66□□□□□ -0.22
SrfQ9JM73 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.66□□□□□ -0.22
SrfQ9JM73 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SrfQ9JM73 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.66□□□□□ -0.22
SrfQ9JM73 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.65□□□□□ -0.22
SrfQ9JM73 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.65□□□□□ -0.22
SrfQ9JM73 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.65□□□□□ -0.22
SrfQ9JM73 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.65□□□□□ -0.22
SrfQ9JM73 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SrfQ9JM73 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms