Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Gm44855-201ENSMUST00000205725 362 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim54Q9ERP3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Trim54Q9ERP3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Syt7-205ENSMUST00000224135 1557 ntBASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Gm11424-201ENSMUST00000121929 829 ntBASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.76■□□□□ 0.11
Trim54Q9ERP3 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim54Q9ERP3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gm8749-201ENSMUST00000117737 331 ntBASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gm27838-201ENSMUST00000184829 128 ntBASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim54Q9ERP3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim54Q9ERP3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim54Q9ERP3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim54Q9ERP3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim54Q9ERP3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim54Q9ERP3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim54Q9ERP3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms