Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Gm9726-201ENSMUST00000180321 678 ntBASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Gm37917-201ENSMUST00000194711 392 ntBASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Gm9908-201ENSMUST00000211534 448 ntBASIC14.24□□□□□ -0.13
Rrp8Q9DB85 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Mir125a-201ENSMUST00000083545 68 ntBASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Gm28760-201ENSMUST00000185995 736 ntBASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp8Q9DB85 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Prob1-201ENSMUST00000097619 3021 ntBASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Gm6912-201ENSMUST00000117218 544 ntBASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Gm9797-201ENSMUST00000052902 613 ntBASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp8Q9DB85 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Gm12138-201ENSMUST00000122180 951 ntBASIC14.21□□□□□ -0.13
Rrp8Q9DB85 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms