Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Efs-202ENSMUST00000227037 2540 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm25287-201ENSMUST00000103846 110 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm22918-201ENSMUST00000103855 110 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm13464-201ENSMUST00000119418 935 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm7774-201ENSMUST00000200064 533 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.94□□□□□ -0.02
Vps28Q9D1C8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm22065-201ENSMUST00000103753 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm22066-201ENSMUST00000103761 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24932-201ENSMUST00000103763 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24115-201ENSMUST00000103799 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm22190-201ENSMUST00000103827 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm22191-201ENSMUST00000103831 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24721-201ENSMUST00000103849 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm28018-201ENSMUST00000103869 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm26399-201ENSMUST00000103937 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm25349-201ENSMUST00000177728 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm23616-201ENSMUST00000177797 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm25871-201ENSMUST00000177816 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24752-201ENSMUST00000178240 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24496-201ENSMUST00000178287 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm25649-201ENSMUST00000178476 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm25548-201ENSMUST00000178681 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm23147-201ENSMUST00000178841 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm26095-201ENSMUST00000179270 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm22171-201ENSMUST00000179283 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm23936-201ENSMUST00000179354 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm22619-201ENSMUST00000179516 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm25255-201ENSMUST00000179579 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24755-201ENSMUST00000179691 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm26506-201ENSMUST00000179692 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm25086-201ENSMUST00000179931 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm23243-201ENSMUST00000180047 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24659-201ENSMUST00000180212 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm24169-201ENSMUST00000180244 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm23689-201ENSMUST00000180354 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm27359-201ENSMUST00000184153 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm27785-201ENSMUST00000184268 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm27466-201ENSMUST00000184396 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Gm27703-201ENSMUST00000184836 110 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.93□□□□□ -0.02
Vps28Q9D1C8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms