Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf135Q9CWS1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf135Q9CWS1 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Gm27300-201ENSMUST00000184085 97 ntBASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Gm27335-201ENSMUST00000184758 97 ntBASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf135Q9CWS1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms